Stem-loop prd-mir-5360

Accession

MI0025570

Description

Panagrellus redivivus prd-mir-5360 precursor miRNA

Sequence

ACGAAUCGUCUGAUCAAACUUCUgugcccuauugaaaacuagAAGUUUGAUAUGAGAUUCGACC
.((((((.((..(((((((((((((............)).)))))))))))..))))))))...

Structure

--A      G  UG           -  gcccu 
   CGAAUC UC  AUCAAACUUCU gu     a
   |||||| ||  ||||||||||| ||      
   GCUUAG AG  UAGUUUGAAga ca     u
CCA      -  UA           u  aaagu 

Annotation confidence Not enough data

Genome context

KB455535.1: 263682-263745 [-]

Mature prd-miR-5360-5p

• Accession: MIMAT0030498
• Description: Panagrellus redivivus prd-miR-5360-5p mature miRNA
• Sequence: 1 - ACGAAUCGUCUGAUCAAACUUCU - 23
• Evidence: experimental ; Illumina [1]

Mature prd-miR-5360-3p

• Accession: MIMAT0030499
• Description: Panagrellus redivivus prd-miR-5360-3p mature miRNA
• Sequence: 43 - AAGUUUGAUAUGAGAUUCGACC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295