miRBase entry: prd-mir-7875

Stem-loop prd-mir-7875


Accession
MI0025569
Description
Panagrellus redivivus prd-mir-7875 precursor miRNA


Sequence

GUGGUCCGAAAUGGUUGACAAUGcauugccuuugcaUUGCCGAUCACUUGAGCACACCCcuuu
(((.((.....((((((.(((((((.......))))))).))))))...)).)))........

Structure
--------   G  CGAAA      A       uu 
        GUG UC     UGGUUG CAAUGca  g
        ||| ||     |||||| |||||||  c
        CAC AG     ACUAGC GUUacgu  c
uuucCCCA   G  --UUC      C       uu 


Annotation confidence Not enough data
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Genome context
KB455338.1: 49437-49499 [+]

Database links

Mature prd-miR-7875-5p

Accession MIMAT0030496
Description Panagrellus redivivus prd-miR-7875-5p mature miRNA
Sequence 1 - GUGGUCCGAAAUGGUUGACAAUG - 23
Evidence experimental
Illumina [1]

Mature prd-miR-7875-3p

Accession MIMAT0030497
Description Panagrellus redivivus prd-miR-7875-3p mature miRNA
Sequence 37 - UUGCCGAUCACUUGAGCACACCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295