Stem-loop prd-mir-7874

Accession

MI0025567

Description

Panagrellus redivivus prd-mir-7874 precursor miRNA

Sequence

AAAUCUCAACCUGAAUAAGCGAUUggcauaguagacaaCGCAUAUUAGGGAGAGAUUAGC
.((((((..(((((.((.(((.(((..........)))))).)))))))..))))))...

Structure

--A      AA     A  A   A   gcau 
   AAUCUC  CCUGA UA GCG UUg    a
   ||||||  ||||| || ||| |||     
   UUAGAG  GGAUU AU CGC aac    g
CGA      AG     -  A   -   agau 

Annotation confidence Not enough data

Genome context

KB455279.1: 115674-115733 [-]

Mature prd-miR-7874-5p

• Accession: MIMAT0030492
• Description: Panagrellus redivivus prd-miR-7874-5p mature miRNA
• Sequence: 1 - AAAUCUCAACCUGAAUAAGCGAUU - 24
• Evidence: experimental ; Illumina [1]

Mature prd-miR-7874-3p

• Accession: MIMAT0030493
• Description: Panagrellus redivivus prd-miR-7874-3p mature miRNA
• Sequence: 39 - CGCAUAUUAGGGAGAGAUUAGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23410827
   The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
   "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
   "Genetics (2013) 193:1279-1295