miRBase entry: prd-mir-86

Stem-loop prd-mir-86


Accession
MI0025554
Description
Panagrellus redivivus prd-mir-86 precursor miRNA


Sequence

UAAGUGAAUGCUUUGCCACAGUCUuagaaacugcauuaagCUGGGCUGGGGUUCGCUUAAGC
(((((((((.((..(((.(((.(((((........))))))))))).)).)))))))))...

Structure
---         G  UU   A   U     aaa 
   UAAGUGAAU CU  GCC CAG CUuag   c
   ||||||||| ||  ||| ||| |||||    
   AUUCGCUUG GG  CGG GUC gaauu   u
CGA         G  -U   -   -     acg 


Annotation confidence Not enough data
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Genome context
KB455443.1: 517726-517787 [-]

Database links

Mature prd-miR-86-5p

Accession MIMAT0030466
Description Panagrellus redivivus prd-miR-86-5p mature miRNA
Sequence 1 - UAAGUGAAUGCUUUGCCACAGUCU - 24
Evidence experimental
Illumina [1]

Mature prd-miR-86-3p

Accession MIMAT0030467
Description Panagrellus redivivus prd-miR-86-3p mature miRNA
Sequence 41 - CUGGGCUGGGGUUCGCUUAAGC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23410827
    The draft genome and transcriptome of Panagrellus redivivus are shaped by the harsh demands of a free-living lifestyle
    "Srinivasan J, Dillman AR, Macchietto MG, Heikkinen L, Lakso M, Fracchia KM, Antoshechkin I, Mortazavi A, Wong G, Sternberg PW"
    "Genetics (2013) 193:1279-1295