Stem-loop ptc-MIR6476c

Accession

MI0025469

Description

Populus trichocarpa ptc-MIR6476c precursor miRNA

Sequence

uggagaugcggaUCAGUGGAGAUGAAACAUGAuugcuacagcauugcuaaguguuuaaagaugaacugugugguuauuuccuuggugaauguauuuuua
((((((((((.(((((.((((((((.((((((((..((.((((((....))))))))..)))....)))))..)))))))))))))...))))))))))

Structure

          --g     U        -A     ----   gc  c      g 
uggagaugcg   aUCAG GGAGAUGA  ACAUG    Auu  ua agcauu c
||||||||||   ||||| ||||||||  |||||    |||  || ||||||  
auuuuuaugu   ugguu ccuuuauu  ugugu    uag  au uuguga u
          aag     -        gg     caag   aa  -      a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ptc-miR6476c

• Accession: MIMAT0030369
• Description: Populus trichocarpa ptc-miR6476c mature miRNA
• Sequence: 13 - UCAGUGGAGAUGAAACAUGA - 32
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22442676
   Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
   Puzey JR, Karger A, Axtell M, Kramer EM
   PLoS One (2012) 7:e33034