miRBase entry: cbr-mir-35g-2

Stem-loop cbr-mir-35g-2

Accession

MI0025050

Description

Caenorhabditis briggsae cbr-mir-35g-2 precursor miRNA

Sequence

agccaauuuuuuccguggugauauuccgaaacaagugguuaUCACCGGGUAAAAACUGGUAGA
.((((.(((((.((.((((((((..(((.......))).)))))))))).))))).))))...

Structure

--a    a     u  g        uu   aa 
   gcca uuuuu cc uggugaua  ccg  a
   |||| ||||| || ||||||||  |||  c
   UGGU AAAAA GG GCCACUau  ggu  a
AGA    C     U  -        -u   ga

Annotation confidence Not enough data

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Genome context

chrX: 15374624-15374686 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35g-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-35g

Accession	MIMAT0029919
Description	Caenorhabditis briggsae cbr-miR-35g mature miRNA
Sequence	42 - UCACCGGGUAAAAACUGGUAGA - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508