miRBase entry: cbr-mir-2231

Stem-loop cbr-mir-2231


Accession
MI0025047
Description
Caenorhabditis briggsae cbr-mir-2231 precursor miRNA


Sequence

aacgguaucaaccucagguagcagagaccacaugacugcuagcUCCCUGAGUAGCUGCCGUUGA
(((((((.....((((((((((((...........))))))....))))))....)))))))..

Structure
--       ucaac      ----      agac 
  aacggua     cucagg    uagcag    c
  |||||||     ||||||    ||||||    a
  UUGCCGU     GAGUCC    aucguc    c
AG       -CGAU      CUcg      agua 


Annotation confidence Not enough data
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Genome context
chrX: 4430575-4430638 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from cbr-mir-2231
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cbr-miR-2231

Accession MIMAT0029917
Description Caenorhabditis briggsae cbr-miR-2231 mature miRNA
Sequence 44 - UCCCUGAGUAGCUGCCGUUGA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23363624
    High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
    "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
    "Genome Res (2013) 23:497-508