miRBase entry: mmu-mir-126b

Stem-loop mmu-mir-126b


Accession
MI0025035
Symbol
MGI: Mir126b
Description
Mus musculus mmu-mir-126b precursor miRNA

Literature search
200 open access papers mention mmu-mir-126b
(1726 sentences)

Sequence

472189 reads, 10 reads per million, 98 experiments
AUUAUUACUCACGGUACGAGUUugaagugucacagCGCGUACCAAAAGUAAUAAUGUG
(((((((((...((((((.((((((....))).))).))))))...)))))))))...

Structure
---         CAC      A   -   a 
   AUUAUUACU   GGUACG GUU uga g
   |||||||||   |||||| ||| |||  
   UAAUAAUGA   CCAUGC Cga acu u
GUG         AAA      G   c   g 


Annotation confidence Not enough data
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Genome context
chr2: 26591363-26591420 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-126b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-126b-5p

Accession MIMAT0029894
Description Mus musculus mmu-miR-126b-5p mature miRNA
Sequence 1 - AUUAUUACUCACGGUACGAGUU - 22
Evidence experimental
RNAseq [1]

Mature mmu-miR-126b-3p

Accession MIMAT0029895
Description Mus musculus mmu-miR-126b-3p mature miRNA
Sequence 36 - CGCGUACCAAAAGUAAUAAUGUG - 58
Evidence experimental
RNAseq [1]

References

  1. PubMed ID: 23325850
    Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
    "Castellano L, Stebbing J"
    "Nucleic Acids Res (2013) 41:3339-3351