Stem-loop mmu-mir-465d

Accession

MI0025028

Symbol

MGI: Mir465d

Description

Mus musculus mmu-mir-465d precursor miRNA

Literature search

6 open access papers mention mmu-mir-465d
(27 sentences)

Sequence

50 reads, 11 reads per million, 13 experiments

UAUUUAGAAUGGUACUGAUGUGAugaaauaaaaaauUGAUCAGGGCCUUUCUGAGUAA
(((((((((.(((.(((((..(((..........))).))))).))).))))))))).

Structure

-         U   A     GU   gaaa 
 UAUUUAGAA GGU CUGAU  GAu    u
 ||||||||| ||| |||||  |||     
 AUGAGUCUU CCG GACUA  Uua    a
A         U   G     -G   aaaa 

Annotation confidence High

Genome context

chrX: 66822656-66822713 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from mmu-mir-465d

Mature mmu-miR-465d-5p

• Accession: MIMAT0029880
• Description: Mus musculus mmu-miR-465d-5p mature miRNA
• Sequence: 1 - UAUUUAGAAUGGUACUGAUGUGA - 23
• Evidence: experimental ; RNAseq [1]

Mature mmu-miR-465d-3p

• Accession: MIMAT0029881
• Description: Mus musculus mmu-miR-465d-3p mature miRNA
• Sequence: 37 - UGAUCAGGGCCUUUCUGAGUAA - 58
• Evidence: experimental ; RNAseq [1]

References

1. PubMed ID: 23325850
   Deep sequencing of small RNAs identifies canonical and non-canonical miRNA and endogenous siRNAs in mammalian somatic tissues
   "Castellano L, Stebbing J"
   "Nucleic Acids Res (2013) 41:3339-3351