Stem-loop cbn-mir-1-1

Accession

MI0024872

Description

Caenorhabditis brenneri cbn-mir-1-1 precursor miRNA

Sequence

caugcuucuucuacaugcccauacuauaucguaaauggauaUGGAAUGUAAAGAAGUAUGUA
((((((((((.(((((..(((((((((.......)))).))))).)))))))))))))))..

Structure

--          c     gc     -    au 
  caugcuucuu uacau  ccaua cuau  c
  |||||||||| |||||  ||||| ||||  g
  GUAUGAAGAA AUGUA  GGUau ggua  u
AU          -     -A     a    aa 

Annotation confidence Not enough data

Genome context

Cbre_Contig112: 224095-224156 [+]

Mature cbn-miR-1

• Accession: MIMAT0029710
• Description: Caenorhabditis brenneri cbn-miR-1 mature miRNA
• Sequence: 42 - UGGAAUGUAAAGAAGUAUGUA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508