Stem-loop crm-mir-7604

Accession

MI0024760

Description

Caenorhabditis remanei crm-mir-7604 precursor miRNA

Sequence

55 reads, 1.0 reads per million, 4 experiments

CGAUGUUCAGUUAUGGAUACGUggaaaugaagaagauauuggaaacGUAUGCCUAACUGAGUAUCAUC
.((((((((((((.((((((((...((((.......))))....)))))).))))))))))))))...

Structure

--C            U  -      -gga    aa 
   GAUGUUCAGUUA GG AUACGU    aaug  g
   |||||||||||| || ||||||    ||||  a
   CUAUGAGUCAAU CC UAUGca    uuau  a
CUA            -  G      aagg    ag 

Annotation confidence High

Genome context

Crem_Contig84: 278840-278907 [+]

Mature crm-miR-7604-5p

• Accession: MIMAT0029621
• Description: Caenorhabditis remanei crm-miR-7604-5p mature miRNA
• Sequence: 1 - CGAUGUUCAGUUAUGGAUACGU - 22
• Evidence: experimental ; Illumina [1]

Mature crm-miR-7604-3p

• Accession: MIMAT0056888
• Description: Caenorhabditis remanei crm-miR-7604-3p mature miRNA
• Sequence: 47 - GUAUGCCUAACUGAGUAUCAUC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508