Stem-loop crm-mir-7602

Accession

MI0024758

Description

Caenorhabditis remanei crm-mir-7602 precursor miRNA

Sequence

4476 reads, 43.0 reads per million, 9 experiments

UGAGAUUGACCCUUCAGUAGUUACUuaugcauaauacaagUUACUACAAGCGGAAUCUCAUC
(((((((..(((((..(((((.((((...........)))).)))))))).)))))))))..

Structure

--       GA  -   CA     U    augc 
  UGAGAUU  CC CUU  GUAGU ACUu    a
  |||||||  || |||  ||||| ||||    u
  ACUCUAA  GG GAA  CAUCA Ugaa    a
CU       --  C   --     U    caua 

Annotation confidence High

Genome context

Crem_Contig16: 1043371-1043432 [+]

Mature crm-miR-7602-5p

• Accession: MIMAT0029619
• Description: Caenorhabditis remanei crm-miR-7602-5p mature miRNA
• Sequence: 1 - UGAGAUUGACCCUUCAGUAGUUACU - 25
• Evidence: experimental ; Illumina [1]

Mature crm-miR-7602-3p

• Accession: MIMAT0056887
• Description: Caenorhabditis remanei crm-miR-7602-3p mature miRNA
• Sequence: 41 - UUACUACAAGCGGAAUCUCAUC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508