Stem-loop crm-mir-7597

Accession

MI0024749

Description

Caenorhabditis remanei crm-mir-7597 precursor miRNA

Sequence

8741 reads, 82.0 reads per million, 8 experiments

UGCUACUAUCAGCUUUGGUUAUAuacauucccacaacuuaUAACCAGGCUCAUAGUAGUUCU
.((((((((.(((((.(((((((...............)))))))))))).))))))))...

Structure

--U        C     U       uacauu 
   GCUACUAU AGCUU GGUUAUA      c
   |||||||| ||||| |||||||      c
   UGAUGAUA UCGGA CCAAUau      c
UCU        C     -       ucaaca 

Annotation confidence High

Genome context

Crem_Contig93: 217779-217840 [-]

Clustered miRNAs

15 other miRNAs are < 10 kb from crm-mir-7597

Mature crm-miR-7597-5p

• Accession: MIMAT0056884
• Description: Caenorhabditis remanei crm-miR-7597-5p mature miRNA
• Sequence: 1 - UGCUACUAUCAGCUUUGGUUAUA - 23
• Evidence: experimental ; Illumina [1]

Mature crm-miR-7597-3p

• Accession: MIMAT0029612
• Description: Caenorhabditis remanei crm-miR-7597-3p mature miRNA
• Sequence: 41 - UAACCAGGCUCAUAGUAGUUCU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23363624
   High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
   "Shi Z, Montgomery TA, Qi Y, Ruvkun G"
   "Genome Res (2013) 23:497-508