miRBase entry: cbr-mir-785b

Stem-loop cbr-mir-785b

Accession

MI0024746

Description

Caenorhabditis briggsae cbr-mir-785b precursor miRNA

Sequence

agaaguuagaguauuuucucuuagccaacacauugauucgcUAAGUGAAUUCUCUACCUUCGGU
.((((.(((((....(((.((((((.((........)).)))))).)))..))))).))))...

Structure

--a    u     uauu   u      c  cac 
   gaag uagag    uuc cuuagc aa   a
   |||| |||||    ||| |||||| ||    
   CUUC AUCUC    AAG GAAUcg uu   u
UGG    C     --UU   U      c  agu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chrX: 4421255-4421318 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from cbr-mir-785b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cbr-miR-785b

Accession	MIMAT0029609
Description	Caenorhabditis briggsae cbr-miR-785b mature miRNA
Sequence	42 - UAAGUGAAUUCUCUACCUUCGGU - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 23363624
High-throughput sequencing reveals extraordinary fluidity of miRNA, piRNA, and siRNA pathways in nematodes
"Shi Z, Montgomery TA, Qi Y, Ruvkun G"
"Genome Res (2013) 23:497-508