Stem-loop ipu-mir-551

Accession

MI0024678

Description

Ictalurus punctatus ipu-mir-551 precursor miRNA

Sequence

aaaccaagcauggguguggccugaauccuccaaugGCGACCCAUCCUUGGUUUCU
((((((((.((((((...(((.............))).)))))).))))))))..

Structure

--        c      gug   ugaau 
  aaaccaag augggu   gcc     c
  |||||||| ||||||   |||     c
  UUUGGUUC UACCCA   CGg     u
UC        C      --G   uaacc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-551

• Accession: MIMAT0029542
• Description: Ictalurus punctatus ipu-miR-551 mature miRNA
• Sequence: 36 - GCGACCCAUCCUUGGUUUCU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174