Stem-loop ipu-mir-489

Accession

MI0024641

Description

Ictalurus punctatus ipu-mir-489 precursor miRNA

Sequence

uggucguauguaugacgucauuuacuucaaaguuuggagUGACAUCAUAUGUACGGCUGCU
.((((((((((((((.((((((((((....)))...))))))).))))))))))))))...

Structure

--u              c       ---   u 
   ggucguauguauga gucauuu   acu c
   |||||||||||||| |||||||   |||  
   UCGGCAUGUAUACU CAGUgag   uga a
UCG              A       guu   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-489

• Accession: MIMAT0029520
• Description: Ictalurus punctatus ipu-miR-489 mature miRNA
• Sequence: 40 - UGACAUCAUAUGUACGGCUGCU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174