Stem-loop ipu-mir-20a

Accession

MI0024566

Description

Ictalurus punctatus ipu-mir-20a precursor miRNA

Sequence

uaaagugcuuauagugcagguaguauuucugucaucuACUGCAGUGUGAGCACUUGAAGU
..(((((((((((.(((((.(((............)))))))).))))))))))).....

Structure

---ua           g     g   uauuu 
     aagugcuuaua ugcag uag     c
     ||||||||||| ||||| |||      
     UUCACGAGUGU ACGUC Auc     u
UGAAG           G     -   uacug 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-20a

• Accession: MIMAT0029462
• Description: Ictalurus punctatus ipu-miR-20a mature miRNA
• Sequence: 38 - ACUGCAGUGUGAGCACUUGAAGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174