Stem-loop ipu-mir-196a-1

Accession

MI0024543

Description

Ictalurus punctatus ipu-mir-196a-1 precursor miRNA

Sequence

UAGGUAGUUUCAUGUUGUUGGGAuuggcuuccuggcucgacaacaagaaacugccuuga
.((((((((((.((((((((((...((...))...)))))))))).))))))))))...

Structure

--U          A          Auu  c 
   AGGUAGUUUC UGUUGUUGGG   gg  
   |||||||||| ||||||||||   || u
   uccgucaaag acaacagcuc   cc  
agu          a          ggu  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-196a

• Accession: MIMAT0029448
• Description: Ictalurus punctatus ipu-miR-196a mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174