Stem-loop ipu-mir-1388

Accession

MI0024503

Description

Ictalurus punctatus ipu-mir-1388 precursor miRNA

Literature search

1 open access papers mention ipu-mir-1388
(1 sentences)

Sequence

aggacuguccaaccugagaaugcuugaguuuuggucaAUCUCAGGUUCGUCAGCCCAUGA
.((.(((.(.(((((((((.((((........)).)).))))))))).).))).))....

Structure

---a  a   u c         a  -  uga 
    gg cug c aaccugaga ug cu   g
    || ||| | ||||||||| || ||    
    CC GAC G UUGGACUCU ac gg   u
AGUA  C   U C         A  u  uuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ipu-miR-1388

• Accession: MIMAT0029415
• Description: Ictalurus punctatus ipu-miR-1388 mature miRNA
• Sequence: 38 - AUCUCAGGUUCGUCAGCCCAUGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23342099
   Identification and characterization of microRNAs in channel catfish (Ictalurus punctatus) by using Solexa sequencing technology
   Xu Z, Chen J, Li X, Ge J, Pan J, Xu X
   PLoS One (2013) 8:e54174