Stem-loop ghr-MIR7490

Accession

MI0024174

Description

Gossypium hirsutum ghr-MIR7490 precursor miRNA

Literature search

1 open access papers mention ghr-MIR7490
(1 sentences)

Sequence

uuauuugauacacugcgguggagauuuuugacuccacaagcauauugaggauuugguaaaguguauuauaugguguaguaaaaaauaaaaaaauuuauuauauaaauaaaugugagacuugucacacucuuaacacguuuguggAGUCUAGAAAACUUCACUGACGGUguaucaaaua
.((((((((((((((((((((((.(((((((((((((((((...((((((((((....))))..........((((((((((...........)))))))))).......(((((......))))).))))))...)))))))))))).))))).)))))))).))))))))))))))

Structure

u              -        a     -            aua      --auuugguaaaguguauuauaug          aaau 
 uauuugauacacug cgguggag uuuuu gacuccacaagc   uugagg                        guguaguaaa    a
 |||||||||||||| |||||||| ||||| ||||||||||||   ||||||                        ||||||||||    a
 auaaacuaugUGGC GUCACUUC AAAGA CUGAgguguuug   aauucu                        uauauuauuu    a
-              A        A     U            cac      cacacuguucagaguguaaauaaa          aaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ghr-miR7490

• Accession: MIMAT0029132
• Description: Gossypium hirsutum ghr-miR7490 mature miRNA
• Sequence: 145 - AGUCUAGAAAACUUCACUGACGGU - 168
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138860
   A comparative miRNAome analysis reveals seven fiber initiation-related and 36 novel miRNAs in developing cotton ovules
   "Wang ZM, Xue W, Dong CJ, Jin LG, Bian SM, Wang C, Wu XY, Liu JY"
   "Mol Plant (2012) 5:889-900