Stem-loop mdo-mir-7343

Accession

MI0023874

Description

Monodelphis domestica mdo-mir-7343 precursor miRNA

Sequence

32498 reads, 632.0 reads per million, 5 experiments

UCAUGGAACCCGGACGUGAGCgauguaaccaccauauguacguagCCCACUUCCAGUUUCUGUGGCC
.(((((((.(.(((.(((.((.(((((...........))))).)).))).))).).)))))))...

Structure

--U       C C   C   A  g     acca 
   CAUGGAA C GGA GUG GC augua    c
   ||||||| | ||| ||| || |||||    c
   GUGUCUU G CCU CAC Cg ugcau    a
CCG       U A   U   C  a     guau 

Annotation confidence High

Genome context

ref|NC_077233.2|: 142889694-142889760 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-7343

Mature mdo-miR-7343-5p

• Accession: MIMAT0028696
• Description: Monodelphis domestica mdo-miR-7343-5p mature miRNA
• Sequence: 1 - UCAUGGAACCCGGACGUGAGC - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7343-3p

• Accession: MIMAT0028697
• Description: Monodelphis domestica mdo-miR-7343-3p mature miRNA
• Sequence: 46 - CCCACUUCCAGUUUCUGUGGCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45