Stem-loop mdo-mir-193b

Accession

MI0023850

Description

Monodelphis domestica mdo-mir-193b precursor miRNA

Sequence

1318 reads, 26 reads per million, 5 experiments

CGGGGUUUUGAGGGCGAGAUGAguuuauguuuuauccAACUGGCCCACAAAGUCCCGCU
((((((((((.((((.((.((.((.........)).)).)).)))).))))))))))..

Structure

--          A    G  A  A  uua 
  CGGGGUUUUG GGGC AG UG gu   u
  |||||||||| |||| || || ||   g
  GCCCUGAAAC CCCG UC Ac ua   u
UC          A    G  A  c  uuu 

Annotation confidence High

Genome context

chr6: 108685053-108685111 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-193b

Mature mdo-miR-193b-5p

• Accession: MIMAT0028652
• Description: Monodelphis domestica mdo-miR-193b-5p mature miRNA
• Sequence: 1 - CGGGGUUUUGAGGGCGAGAUGA - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-193b-3p

• Accession: MIMAT0028653
• Description: Monodelphis domestica mdo-miR-193b-3p mature miRNA
• Sequence: 38 - AACUGGCCCACAAAGUCCCGCU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45