miRBase entry: ssc-mir-7142

Stem-loop ssc-mir-7142


Accession
MI0023575
Description
Sus scrofa ssc-mir-7142 precursor miRNA

Literature search
1 open access papers mention ssc-mir-7142
(1 sentences)

Sequence

2 reads, 2 reads per million, 2 experiments
ACUCUCCGAGGGGCCUUCAAGGGcaaguucuugucaccUUUGUUGGCUCCUCUGAAGUGA
(((.((.((((((((..(((((((((....)))...))))))..)))))))).)))))..

Structure
--   C  C        UU      ---   g 
  ACU UC GAGGGGCC  CAAGGG   caa u
  ||| || ||||||||  ||||||   |||  
  UGA AG CUCCUCGG  GUUUcc   guu u
AG   -  U        UU      acu   c 


Annotation confidence Not enough data
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Genome context
chr2: 7444711-7444770 [-]

Database links

Mature ssc-miR-7142-5p

Accession MIMAT0028159
Description Sus scrofa ssc-miR-7142-5p mature miRNA
Sequence 1 - ACUCUCCGAGGGGCCUUCAAGGG - 23
Evidence experimental
Illumina [1]

Mature ssc-miR-7142-3p

Accession MIMAT0028160
Description Sus scrofa ssc-miR-7142-3p mature miRNA
Sequence 39 - UUUGUUGGCUCCUCUGAAGUGA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22953717
    Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
    BMC Genomics (2012) 13:459