Stem-loop bma-mir-5854

Accession

MI0023452

Description

Brugia malayi bma-mir-5854 precursor miRNA

Sequence

acauacuaucauuucauaauuuauucuaguauuuacagcaagaaguguaAACUAAAAUAGAUUGUGAAAAAUUgauaguguga
.((((((((((((((((((((((((.((((..(((((........))))))))).))))))))))))))...)))))))))).

Structure

a          ---              c    au     gca 
 cauacuauca   uuucauaauuuauu uagu  uuaca   a
 ||||||||||   |||||||||||||| ||||  |||||    
 gugugauagU   AAAGUGUUAGAUAA AUCA  Aaugu   g
a          UAA              A    --     gaa 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold60: 178306-178388 [+]

Mature bma-miR-5854

• Accession: MIMAT0026352
• Description: Brugia malayi bma-miR-5854 mature miRNA
• Sequence: 50 - AACUAAAAUAGAUUGUGAAAAAUU - 73
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4