Stem-loop bma-mir-5848

Accession

MI0023446

Description

Brugia malayi bma-mir-5848 precursor miRNA

Sequence

uuuuuugauaugaaauguucaugucuauucugauacuguaugacagUAGGAUAGACAUGAACAUUUUGuaucaaaaag
.((((((((((((((((((((((((((((((...(((((...))))))))))))))))))))))))))))))))))).

Structure

u                              gau     a 
 uuuuugauaugaaauguucaugucuauucu   acugu  
 ||||||||||||||||||||||||||||||   ||||| u
 aaaaacuauGUUUUACAAGUACAGAUAGGA   Ugaca  
g                              ---     g 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold110: 45475-45552 [+]

Mature bma-miR-5848

• Accession: MIMAT0026346
• Description: Brugia malayi bma-miR-5848 mature miRNA
• Sequence: 47 - UAGGAUAGACAUGAACAUUUUG - 68
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4