Stem-loop ccr-mir-7133

Accession

MI0023429

Description

Cyprinus carpio ccr-mir-7133 precursor miRNA

Literature search

1 open access papers mention ccr-mir-7133
(1 sentences)

Sequence

13507 reads, 63.0 reads per million, 25 experiments

aagggugucaguggagacaugcucUGGUGCUGUGUGUUAAACUGUAUcguucuauaacaccuaUAGUUUGAUUCACAGCACAAGAguuugcucucuaugcuucauc
...((((...(((((((((.(((((.((((((((.(((((((((((..(((....)))...))))))))))).)))))))).))))).)).)))))))....))))

Structure

aag    -uca       -  u     G        U           -Uc   c 
   ggug    guggaga ca gcucU GUGCUGUG GUUAAACUGUA   guu u
   ||||    ||||||| || ||||| |||||||| |||||||||||   |||  
   cuac    uaucucu gu ugAGA CACGACAC UAGUUUGAUau   caa a
---    uucg       c  u     A        U           cca   u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-7133-5p

• Accession: MIMAT0058357
• Description: Cyprinus carpio ccr-miR-7133-5p mature miRNA
• Sequence: 25 - UGGUGCUGUGUGUUAAACUGUAU - 47
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-7133-3p

• Accession: MIMAT0026333
• Description: Cyprinus carpio ccr-miR-7133-3p mature miRNA
• Sequence: 64 - UAGUUUGAUUCACAGCACAAGA - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925