Stem-loop ccr-mir-730

Accession

MI0023414

Description

Cyprinus carpio ccr-mir-730 precursor miRNA

Sequence

14607 reads, 65.0 reads per million, 28 experiments

uuuuaggguucucuggucUCCUCAUUGUGCAUGCUGUGUGucuucagucugguccuCACAGCGCCUGCAAUGUGGAGGccaggggacuc
.....((((((((((((((((.((((((...(((((((.(.((.......)).)..)))))))...)))))).))))))))))))))))

Structure

uuuua                U      GCA       -U u  uc 
     ggguucucuggucUCC CAUUGU   UGCUGUG  G cu  a
     |||||||||||||||| ||||||   |||||||  | ||  g
     cucaggggaccGGAGG GUAACG   GCGACAC  c gg  u
-----                U      UCC       uc u  uc 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-730-5p

• Accession: MIMAT0026317
• Description: Cyprinus carpio ccr-miR-730-5p mature miRNA
• Sequence: 19 - UCCUCAUUGUGCAUGCUGUGUG - 40
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-730-3p

• Accession: MIMAT0058348
• Description: Cyprinus carpio ccr-miR-730-3p mature miRNA
• Sequence: 57 - CACAGCGCCUGCAAUGUGGAGG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925