Stem-loop ccr-mir-460

Accession

MI0023405

Description

Cyprinus carpio ccr-mir-460 precursor miRNA

Sequence

41096 reads, 172.0 reads per million, 31 experiments

uuuacuccacggcuCCUGCAUUGUACACACUGUGcggaaaaguuguacaugCACAGCGCAUACAAUGUGGAUGcugugaagcuaag
....((.(((((((((.((((((((..(.(((((((.............))))))).)..))))))))))).)))))).)).....

Structure

-uuua  c      -   U        CA A       gaaaa 
     cu cacggc uCC GCAUUGUA  C CUGUGcg     g
     || |||||| ||| ||||||||  | |||||||     u
     ga gugucG AGG UGUAACAU  G GACACgu     u
gaauc  a      U   -        AC C       acaug 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-460-5p

• Accession: MIMAT0026306
• Description: Cyprinus carpio ccr-miR-460-5p mature miRNA
• Sequence: 15 - CCUGCAUUGUACACACUGUG - 34
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-460-3p

• Accession: MIMAT0026307
• Description: Cyprinus carpio ccr-miR-460-3p mature miRNA
• Sequence: 52 - CACAGCGCAUACAAUGUGGAUG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925