Stem-loop ccr-mir-459

Accession

MI0023404

Description

Cyprinus carpio ccr-mir-459 precursor miRNA

Sequence

11319 reads, 56.0 reads per million, 29 experiments

ucugaccucuugcucUCAGUAACAAGGAUUCAUCCUGUuguggaacacaaauccaaCAGGGAAUCUCUGUUACUGGGGUcaagguucag
.((((.(.((((.(((((((((((.((((((..(((((((.((........))))))))))))))).))))))))))).))))).))))

Structure

u    c u    c           A      AU       u  aac 
 cuga c cuug ucUCAGUAACA GGAUUC  CCUGUug gg   a
 |||| | |||| ||||||||||| ||||||  ||||||| ||    
 gacu g gaac GGGGUCAUUGU UCUAAG  GGACaac cu   c
-    u -    U           C      --       -  aaa 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-459-5p

• Accession: MIMAT0026304
• Description: Cyprinus carpio ccr-miR-459-5p mature miRNA
• Sequence: 16 - UCAGUAACAAGGAUUCAUCCUGU - 38
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-459-3p

• Accession: MIMAT0026305
• Description: Cyprinus carpio ccr-miR-459-3p mature miRNA
• Sequence: 57 - CAGGGAAUCUCUGUUACUGGGGU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925