Stem-loop ccr-mir-738

Accession

MI0023396

Description

Cyprinus carpio ccr-mir-738 precursor miRNA

Sequence

1458723 reads, 137469.0 reads per million, 33 experiments

GCUACGGCCCGCGUCGGGAccuccgucucggugacccccucucucgggagggggcccggggcgggcggcCUCCCCGGCGCGGCGCCUC
.....(((((((((((((.((((((((((((.(.((((((((....))))))))))))))))))).))....)))))))))).)))..

Structure

GCUAC   -          ---A  -          u a        c 
     GGC CCGCGUCGGG    cc uccgucucgg g cccccucu u
     ||| ||||||||||    || |||||||||| | ||||||||  
     CCG GGCGCGGCCC    gg gggcggggcc c gggggagg c
---CU   C          CUCc  c          - -        g 

Annotation confidence Low

Genome context

Unknown

Mature ccr-miR-738-5p

• Accession: MIMAT0026296
• Description: Cyprinus carpio ccr-miR-738-5p mature miRNA
• Sequence: 1 - GCUACGGCCCGCGUCGGGA - 19
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-738-3p

• Accession: MIMAT0058333
• Description: Cyprinus carpio ccr-miR-738-3p mature miRNA
• Sequence: 70 - CUCCCCGGCGCGGCGCCUC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925