Stem-loop ccr-mir-206

Accession

MI0023366

Description

Cyprinus carpio ccr-mir-206 precursor miRNA

Literature search

2 open access papers mention ccr-mir-206
(9 sentences)

Sequence

1582848 reads, 11778.0 reads per million, 30 experiments

uugcucuuugagaugACAUACUUCCUUAUAUCCCCAUAUacgguaauaucaaucuaUGGAAUGUAAGGAAGUGUGUGGucucaagnga
....((((((((((.((((((((((((((((..(((((....(......)....))))).)))))))))))))))).)))))))).))

Structure

uugc  -        g                CC     Uacg ua 
    uc uuugagau ACAUACUUCCUUAUAU  CCAUA    g  a
    || |||||||| ||||||||||||||||  |||||    |   
    ag gaacucuG UGUGUGAAGGAAUGUA  GGUau    c  u
----  n        G                -A     cuaa ua 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-206-5p

• Accession: MIMAT0058306
• Description: Cyprinus carpio ccr-miR-206-5p mature miRNA
• Sequence: 16 - ACAUACUUCCUUAUAUCCCCAUAU - 39
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-206-3p

• Accession: MIMAT0026264
• Description: Cyprinus carpio ccr-miR-206-3p mature miRNA
• Sequence: 57 - UGGAAUGUAAGGAAGUGUGUGG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925