Stem-loop ccr-mir-182

Accession

MI0023346

Description

Cyprinus carpio ccr-mir-182 precursor miRNA

Sequence

642265 reads, 3882.0 reads per million, 33 experiments

aagguucuccgaggguaUUUGGCAAUGGUAGAACUCACAcuggugagguagucagauccggUGGUUCUAGACUUGCCAACUacuaccugagaaca
...((((((....((((.(((((((...((((((...(((((((((.....)))...))))))))))))...))))))).))))....)))))).

Structure

aag      cgag    U       UGG      UCA      ---   g 
   guucuc    ggua UUGGCAA   UAGAAC   CAcugg   uga g
   ||||||    |||| |||||||   ||||||   ||||||   ||| u
   caagag    ucaU AACCGUU   AUCUUG   GUggcc   acu a
--a      ucca    C       CAG      ---      uag   g 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-182-5p

• Accession: MIMAT0026241
• Description: Cyprinus carpio ccr-miR-182-5p mature miRNA
• Sequence: 18 - UUUGGCAAUGGUAGAACUCACA - 39
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-182-3p

• Accession: MIMAT0026242
• Description: Cyprinus carpio ccr-miR-182-3p mature miRNA
• Sequence: 62 - UGGUUCUAGACUUGCCAACU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925