Stem-loop ccr-mir-16c

Accession

MI0023341

Description

Cyprinus carpio ccr-mir-16c precursor miRNA

Literature search

1 open access papers mention ccr-mir-16c
(1 sentences)

Sequence

84903 reads, 420.0 reads per million, 33 experiments

ucuugcuuUAGCAGCAUGUAAAUAUUGGAguuacuccuuggcaaaugccUCCAAUAUUGCUCAUGCUGCUGaagcaaga
((((((((((((((((((..(((((((((..........(((....))))))))))))...))))))))))))))))))

Structure

                  -UA         guuacuccuu   a 
ucuugcuuUAGCAGCAUG   AAUAUUGGA          ggc a
||||||||||||||||||   |||||||||          |||  
agaacgaaGUCGUCGUAC   UUAUAACCU          ccg a
                  UCG         ----------   u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-16c-5p

• Accession: MIMAT0026235
• Description: Cyprinus carpio ccr-miR-16c-5p mature miRNA
• Sequence: 9 - UAGCAGCAUGUAAAUAUUGGA - 29
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-16c-3p

• Accession: MIMAT0058285
• Description: Cyprinus carpio ccr-miR-16c-3p mature miRNA
• Sequence: 50 - UCCAAUAUUGCUCAUGCUGCUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925