Stem-loop ccr-mir-16b

Accession

MI0023340

Description

Cyprinus carpio ccr-mir-16b precursor miRNA

Sequence

787638 reads, 4474.0 reads per million, 33 experiments

ucuugcuuUAGCAGCACGUAAAUAUUGGAGuuacuccuuggccaaugccUCCAAUAUUGCUCGUGCUGCUGaagcaaga
((((((((((((((((((..(((((((((..........(((....))))))))))))...))))))))))))))))))

Structure

                  -UA         Guuacuccuu   c 
ucuugcuuUAGCAGCACG   AAUAUUGGA          ggc a
||||||||||||||||||   |||||||||          |||  
agaacgaaGUCGUCGUGC   UUAUAACCU          ccg a
                  UCG         ----------   u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-16b-5p

• Accession: MIMAT0026234
• Description: Cyprinus carpio ccr-miR-16b-5p mature miRNA
• Sequence: 9 - UAGCAGCACGUAAAUAUUGGAG - 30
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-16b-3p

• Accession: MIMAT0058284
• Description: Cyprinus carpio ccr-miR-16b-3p mature miRNA
• Sequence: 50 - UCCAAUAUUGCUCGUGCUGCUG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925