Stem-loop ccr-mir-15a-1

Accession

MI0023333

Description

Cyprinus carpio ccr-mir-15a-1 precursor miRNA

Literature search

1 open access papers mention ccr-mir-15a-1
(1 sentences)

Sequence

122230 reads, 476.0 reads per million, 33 experiments

ggugUAGCAGCACAGAAUGGUUUGUggugauacagagaugCAGGCCGUGAUGUGCUGCAGCAUc
(((((.((((((((..((((((((((............))))))))))..)))))))).)))))

Structure

     A        GA          gugau 
ggugU GCAGCACA  AUGGUUUGUg     a
||||| ||||||||  ||||||||||      
cUACG CGUCGUGU  UGCCGGACgu     c
     A        AG          agaga 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-15a-5p

• Accession: MIMAT0026228
• Description: Cyprinus carpio ccr-miR-15a-5p mature miRNA
• Sequence: 5 - UAGCAGCACAGAAUGGUUUGU - 25
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-15a-3p

• Accession: MIMAT0058278
• Description: Cyprinus carpio ccr-miR-15a-3p mature miRNA
• Sequence: 41 - CAGGCCGUGAUGUGCUGCAGCAU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925