Stem-loop ccr-mir-137

Accession

MI0023323

Description

Cyprinus carpio ccr-mir-137 precursor miRNA

Literature search

2 open access papers mention ccr-mir-137
(2 sentences)

Sequence

12293 reads, 70.0 reads per million, 33 experiments

uaaaagacucucuucggugACGGGUAUUCUUGGGUGGAUAAUAcggcucucguugUUAUUGCUUAAGAAUACGCGUAGucgaggagaguc
.....((((((((((((..(((.(((((((((((((.((((((((.....)).))))))))))))))))))).)))..))))))))))))

Structure

uaaaa            ug   G             G      -  g 
     gacucucuucgg  ACG GUAUUCUUGGGUG AUAAUA cg c
     ||||||||||||  ||| ||||||||||||| |||||| || u
     cugagaggagcu  UGC CAUAAGAAUUCGU UAUUgu gc c
-----            GA   G             -      u  u 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-137-5p

• Accession: MIMAT0058271
• Description: Cyprinus carpio ccr-miR-137-5p mature miRNA
• Sequence: 20 - ACGGGUAUUCUUGGGUGGAUAAUA - 43
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-137-3p

• Accession: MIMAT0026217
• Description: Cyprinus carpio ccr-miR-137-3p mature miRNA
• Sequence: 56 - UUAUUGCUUAAGAAUACGCGUAG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925