Stem-loop ccr-mir-135c

Accession

MI0023322

Description

Cyprinus carpio ccr-mir-135c precursor miRNA

Literature search

1 open access papers mention ccr-mir-135c
(3 sentences)

Sequence

cuuggucacugcuguguuuUAUGGCUUUCUAUUCCUAUGUGAuuuucuucugucaugucacauaggguucaaagccauuggguacagaguggaag
.....(((((.((((((((.((((((((....(((((((((((...(....)....)))))))))))...)))))))).)))))))))))))...

Structure

cuugg     g        U        CUAU           -uuu u 
     ucacu cuguguuu AUGGCUUU    UCCUAUGUGAu    c u
     ||||| |||||||| ||||||||    |||||||||||    |  
     gguga gacauggg uaccgaaa    gggauacacug    g c
--gaa     -        u        -cuu           uacu u 

Annotation confidence Low

Genome context

Unknown

Mature ccr-miR-135c

• Accession: MIMAT0026216
• Description: Cyprinus carpio ccr-miR-135c mature miRNA
• Sequence: 20 - UAUGGCUUUCUAUUCCUAUGUGA - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925