Stem-loop ccr-mir-128

Accession

MI0023315

Description

Cyprinus carpio ccr-mir-128 precursor miRNA

Literature search

1 open access papers mention ccr-mir-128
(1 sentences)

Sequence

1106053 reads, 5732.0 reads per million, 33 experiments

ggagcggcuggauuCGGGGCCGAGGCACUGUCUGAGAcgcccuacgauucUCACAGUGAACCGGUCUCUUUuccagccccucacu
.(((.(((((((...(((((((...((((((..((((((.....))..))))))))))...)))))))...))))))).)))...

Structure

--g   c       uuC       AGG      CU    --  c 
   gag ggcugga   GGGGCCG   CACUGU  GAGA  cg c
   ||| |||||||   |||||||   ||||||  ||||  || c
   cuc ccgaccu   CUCUGGC   GUGACA  CUcu  gc u
uca   c       UUU       CAA      --    ua  a 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-128-5p

• Accession: MIMAT0058265
• Description: Cyprinus carpio ccr-miR-128-5p mature miRNA
• Sequence: 15 - CGGGGCCGAGGCACUGUCUGAGA - 37
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-128-3p

• Accession: MIMAT0026208
• Description: Cyprinus carpio ccr-miR-128-3p mature miRNA
• Sequence: 51 - UCACAGUGAACCGGUCUCUUU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925