Stem-loop ccr-mir-10d

Accession

MI0023310

Description

Cyprinus carpio ccr-mir-10d precursor miRNA

Literature search

2 open access papers mention ccr-mir-10d
(5 sentences)

Sequence

706093 reads, 4065.0 reads per million, 33 experiments

cucuuuguuccgucgucuauauaUACCCUGUAGAACCGAAUGUGUguuuacacagcacauucaCAGAUUCGGUUUUAGGGGAGUauauggacgaugcaaa
..........((((((((((((((.((((.(((((((((((.((((...............)))).))))))))))))))).))))))))))))))....

Structure

cucuuuguuc              A    G           G    uuuaca 
          cgucgucuauauaU CCCU UAGAACCGAAU UGUg      c
          |||||||||||||| |||| ||||||||||| ||||      a
          guagcagguauaUG GGGG AUUUUGGCUUA ACac      g
------aaac              A    -           G    uuacac 

Annotation confidence High

Genome context

Unknown

Mature ccr-miR-10d-5p

• Accession: MIMAT0026202
• Description: Cyprinus carpio ccr-miR-10d-5p mature miRNA
• Sequence: 24 - UACCCUGUAGAACCGAAUGUGU - 45
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-10d-3p

• Accession: MIMAT0058262
• Description: Cyprinus carpio ccr-miR-10d-3p mature miRNA
• Sequence: 64 - CAGAUUCGGUUUUAGGGGAGU - 84
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925