Stem-loop ccr-let-7i

Accession

MI0023300

Description

Cyprinus carpio ccr-let-7i precursor miRNA

Literature search

6 open access papers mention ccr-let-7i
(32 sentences)

Sequence

uuuagccguguacuggcUGAGGUAGUAGUUUGUGCUGUugguugggaugugacauugcccguuauggagaugacugcgcaagcuacucccuugccagugcugguuacacucu
..((((((.((((((((.((((.((((((((((((.((..(((....((((((.......))))))..))).)).)))))))))))).))))))))))))))))))......

Structure

----uu      u        U    U            U  ug   ggga      au 
      uagccg guacuggc GAGG AGUAGUUUGUGC GU  guu    ugugac  u
      |||||| |||||||| |||| |||||||||||| ||  |||    ||||||  g
      auuggu cgugaccg uucc ucaucgaacgcg ca  uag    guauug  c
ucucac      -        -    c            u  -g   --ag      cc 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-let-7i

• Accession: MIMAT0026192
• Description: Cyprinus carpio ccr-let-7i mature miRNA
• Sequence: 18 - UGAGGUAGUAGUUUGUGCUGU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925