Stem-loop cme-MIR394b

Accession

MI0023243

Description

Cucumis melo cme-MIR394b precursor miRNA

Sequence

uagaguuuaUUGGCAUUCUGUCCACCUCCccuccuuucuucaaaucuuuuuauucaaauuuuuugguuuuuguuuuuuuuuuuuuuuauuaaagaaaauuuauuuauaauauagggggaggugggcauacugccaacugaguucug
(((((((((((((((...((((((((((((((.........(((((..................)))))..(((((((((..(....)..)))))))))..............))))))))))))))...)))))).)))))))))

Structure

         -      UUC              ccuuucuucaaaucuuuuuauucaaauuuuuugguuuuu         uu u 
uagaguuua UUGGCA   UGUCCACCUCCccu                                       guuuuuuuu  u u
||||||||| ||||||   ||||||||||||||                                       |||||||||  |  
gucuugagu aaccgu   acggguggaggggg                                       uaaaagaaa  a u
         c      cau              -------------------------auauaauauuuauu         uu u 

Annotation confidence Not enough data

Genome context

Unknown

Mature cme-miR394b

• Accession: MIMAT0026139
• Description: Cucumis melo cme-miR394b mature miRNA
• Sequence: 10 - UUGGCAUUCUGUCCACCUCC - 29
• Evidence: not_experimental

References

1. PubMed ID: 22753475
   The genome of melon (Cucumis melo L.)
   "Garcia-Mas J, Benjak A, Sanseverino W, Bourgeois M, Mir G, Gonzalez VM, Henaff E, Camara F, Cozzuto L, Lowy E, Alioto T, Capella-Gutierrez S, Blanca J, Canizares J, Ziarsolo P, Gonzalez-Ibeas D, Rodriguez-Moreno L, Droege M, Du L, Alvarez-Tejado M, Lorent"
   "Proc Natl Acad Sci U S A (2012) 109:11872-11877