Stem-loop mdm-MIR7127a

Accession

MI0023168

Description

Malus domestica mdm-MIR7127a precursor miRNA

Literature search

1 open access papers mention mdm-MIR7127a
(1 sentences)

Sequence

993 reads, 77.0 reads per million, 27 experiments

auuggaAUACUCAUCGAAUUUGUCAUAguguuucaguuguguuauggaaccaauuuuucucccacucccauacuuaccacccaauuaauggcacagcuagaaCACUCUGACAAAUUGGAUGAGUauuccaau
(((((((((((((((.(((((((((.(((((((.(((((((((((..........................................))))))))))).))))))).))))))))).)))))))))))))))

Structure

               G         U       c           ggaaccaauuuuucucccac 
auuggaAUACUCAUC AAUUUGUCA Aguguuu aguuguguuau                    u
||||||||||||||| ||||||||| ||||||| |||||||||||                     
uaaccuuaUGAGUAG UUAAACAGU UCACaag ucgacacggua                    c
               G         C       a           auuaacccaccauucauacc 

Annotation confidence Medium

Genome context

MDC012422.128: 844-975 [+]

Mature mdm-miR7127a-5p

• Accession: MIMAT0026064
• Description: Malus domestica mdm-miR7127a-5p mature miRNA
• Sequence: 7 - AUACUCAUCGAAUUUGUCAUA - 27
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR7127a-3p

• Accession: MIMAT0056731
• Description: Malus domestica mdm-miR7127a-3p mature miRNA
• Sequence: 103 - CACUCUGACAAAUUGGAUGAGU - 124
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47