Stem-loop mdm-MIR393d

Accession

MI0023165

Description

Malus domestica mdm-MIR393d precursor miRNA

Literature search

6 open access papers mention mdm-MIR393d
(31 sentences)

Sequence

90789 reads, 5592.0 reads per million, 32 experiments

gguggaggcuUCCAAAGGGAUCGCAUUGAUCUaauugaucagauaugucaaacaucauccgcauagacauaugguggguuauguuuucgucuguguagucggAUCAUGCGAUCCCUUCGGACGuuuccauc
(((((((((.(((.((((((((((((.(((((.((((..(((((.....((((((.(((((((((....))).)))))).))))))..)))))..)))).))))))))))))))))).))).)))))))))

Structure

         u   A            U     a    au     auguc      c      -   g 
gguggaggc UCC AAGGGAUCGCAU GAUCU auug  cagau     aaacau auccgc aua a
||||||||| ||| |||||||||||| ||||| ||||  |||||     |||||| |||||| |||  
cuaccuuuG AGG UUCCCUAGCGUA CUAgg ugau  gucug     uuugua ugggug uau c
         C   C            -     c    gu     ---cu      u      g   a 

Annotation confidence High

Genome context

Unknown

Mature mdm-miR393d-5p

• Accession: MIMAT0056728
• Description: Malus domestica mdm-miR393d-5p mature miRNA
• Sequence: 11 - UCCAAAGGGAUCGCAUUGAUCU - 32
• Evidence: experimental ; unknown

Mature mdm-miR393d-3p

• Accession: MIMAT0026061
• Description: Malus domestica mdm-miR393d-3p mature miRNA
• Sequence: 103 - AUCAUGCGAUCCCUUCGGACG - 123
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47