Stem-loop mdm-MIR7121f

Accession

MI0023149

Description

Malus domestica mdm-MIR7121f precursor miRNA

Literature search

1 open access papers mention mdm-MIR7121f
(1 sentences)

Sequence

59463 reads, 5195.0 reads per million, 25 experiments

UCCUCUUGGUGAUCGCCCUGCcggccuuccggauucgggaacuucuggAUUCAGGGCCUGCAUAUGGACauggcgauuagcaaaggga
((((.(((.((((((((.((((((((((..(((((((((....))))))))))))))).......)).)).)))))))).))).))))

Structure

    C   G        C  -  -------      cc         a 
UCCU UUG UGAUCGCC UG Cc       ggccuu  ggauucggg a
|||| ||| |||||||| || ||       ||||||  |||||||||  
aggg aac auuagcgg aC GG       CCGGGA  CUUAggucu c
    a   g        u  A  UAUACGU      --         u 

Annotation confidence Low

Genome context

MDC009272.295: 603-690 [+]

Mature mdm-miR7121f-5p

• Accession: MIMAT0026045
• Description: Malus domestica mdm-miR7121f-5p mature miRNA
• Sequence: 1 - UCCUCUUGGUGAUCGCCCUGC - 21
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR7121f-3p

• Accession: MIMAT0056716
• Description: Malus domestica mdm-miR7121f-3p mature miRNA
• Sequence: 49 - AUUCAGGGCCUGCAUAUGGAC - 69
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47