Stem-loop mdm-MIR7121e

Accession

MI0023148

Description

Malus domestica mdm-MIR7121e precursor miRNA

Literature search

1 open access papers mention mdm-MIR7121e
(1 sentences)

Sequence

64127 reads, 5488.0 reads per million, 25 experiments

uauuacccucaUCCUCUUGGUGAUCGCCCUGCcccacccauauggccuucugaauucagggaacuucuggauucagggccugcauauggacAGGGUGGUUACCAAUGGGAUGacgguaaua
(((((((.(((((((.(((((((((((((((......((((((((((..(((((((((((.....)))))))))))))))...)))))).))))))))))))))).))))))).)))))))

Structure

       c       C               Ccccac      ---    uu           g 
uauuacc ucaUCCU UUGGUGAUCGCCCUG      ccauau   ggcc  cugaauucagg a
||||||| ||||||| |||||||||||||||      ||||||   ||||  ||||||||||| a
auaaugg aGUAGGG AACCAUUGGUGGGAc      gguaua   ccgg  gacuuaggucu c
       c       U               -----a      cgu    --           u 

Annotation confidence High

Genome context

MDC006416.180: 729-849 [-]

Mature mdm-miR7121e-5p

• Accession: MIMAT0026044
• Description: Malus domestica mdm-miR7121e-5p mature miRNA
• Sequence: 12 - UCCUCUUGGUGAUCGCCCUGC - 32
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR7121e-3p

• Accession: MIMAT0056715
• Description: Malus domestica mdm-miR7121e-3p mature miRNA
• Sequence: 92 - AGGGUGGUUACCAAUGGGAUG - 112
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47