Stem-loop mdm-MIR7121a

Accession

MI0023144

Description

Malus domestica mdm-MIR7121a precursor miRNA

Literature search

1 open access papers mention mdm-MIR7121a
(1 sentences)

Sequence

100894 reads, 7690.0 reads per million, 28 experiments

gccgccguagaaauauuacuauuaccauccUCCUCUUGGUGAUCGCCCUGUcccauauggccuucuggauucagggccugcacAGGGUGAUUAACAAAGGGAUGacgguaauauuuaauucaugauguuggc
((((.(((......((((.(((((((.((.((((.(((..(((((((((((..((...((((((........)))))))).)))))))))))..))).)))).)).)))))))..)))).....))).))))

Structure

    c   agaaau    -c       a  c    C   GU           cc  uau      cug 
gccg cgu      auua  uauuacc uc UCCU UUG  GAUCGCCCUGU  ca   ggccuu   g
|||| |||      ||||  ||||||| || |||| |||  |||||||||||  ||   ||||||    
cggu gua      uaau  auaaugg aG AGGG AAC  UUAGUGGGAca  gu   ccggga   a
    u   -guacu    uu       c  U    A   AA           -c  ---      cuu 

Annotation confidence High

Genome context

MDC009272.709: 4104-4235 [-]

Mature mdm-miR7121a-5p

• Accession: MIMAT0026040
• Description: Malus domestica mdm-miR7121a-5p mature miRNA
• Sequence: 31 - UCCUCUUGGUGAUCGCCCUGU - 51
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR7121a-3p

• Accession: MIMAT0056711
• Description: Malus domestica mdm-miR7121a-3p mature miRNA
• Sequence: 84 - AGGGUGAUUAACAAAGGGAUG - 104
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47