Stem-loop mdm-MIR482d

Accession

MI0023143

Description

Malus domestica mdm-MIR482d precursor miRNA

Literature search

5 open access papers mention mdm-MIR482d
(10 sentences)

Sequence

138853 reads, 6742.0 reads per million, 28 experiments

aggaaguuguuggAAUGGAAGGGUAGGAAAGAAGaaacuucucuuguauguuccaaauucaagagauaaaauuUCUUUCCUAUCCCUCCCAUUCCUuckauuuucu
(((((((.(..(((((((.(((((((((((((((.....(((((((.((.......)).))))))).....))))))))))).)))).)))))))..).)))))))

Structure

       u uu       A    -           aaacu       u  gu 
aggaagu g  ggAAUGG AGGG UAGGAAAGAAG     ucucuug au  u
||||||| |  ||||||| |||| |||||||||||     ||||||| ||  c
ucuuuua c  CCUUACC UCCC AUCCUUUCUuu     agagaac ua  c
       k uU       C    U           aaaau       u  aa 

Annotation confidence High

Genome context

Unknown

Mature mdm-miR482d-5p

• Accession: MIMAT0026039
• Description: Malus domestica mdm-miR482d-5p mature miRNA
• Sequence: 14 - AAUGGAAGGGUAGGAAAGAAG - 34
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR482d-3p

• Accession: MIMAT0056710
• Description: Malus domestica mdm-miR482d-3p mature miRNA
• Sequence: 74 - UCUUUCCUAUCCCUCCCAUUCCU - 96
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47