Stem-loop mdm-MIR168a

Accession

MI0023036

Description

Malus domestica mdm-MIR168a precursor miRNA

Literature search

8 open access papers mention mdm-MIR168a
(16 sentences)

Sequence

gcggucucuaauUCGCUUGGUGCAGGUCGGGAAccgcuuugcccuacuuuaccgugucugggccuaugagcuagguggcucgauguguaaucggccacagggcaaaacaggucccgccuugcaucaacugaaucggagaccgc
(((((((((.(((((.((((((((((.(((((.((..((((((((............((((.........))))(((((.((((.....)))))))))))))))))...))))))).)))))))))).))))).)))))))))

Structure

         a     C          U     A  -gc        acuuuaccgugucugggccuaugagcuag     u    g 
gcggucucu auUCG UUGGUGCAGG CGGGA cc   uuugcccu                             guggc cgau u
||||||||| ||||| |||||||||| ||||| ||   ||||||||                             ||||| |||| g
cgccagagg uaagu aacuacguuc gcccu gg   aaacggga                             caccg gcua u
         c     c          c     -  aca        -----------------------------     -    a 

Annotation confidence Low

Genome context

MDC036375.12: 8051-8193 [+]

Mature mdm-miR168a

• Accession: MIMAT0025932
• Description: Malus domestica mdm-miR168a mature miRNA
• Sequence: 13 - UCGCUUGGUGCAGGUCGGGAA - 33
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47