Stem-loop mdm-MIR167a

Accession

MI0023026

Description

Malus domestica mdm-MIR167a precursor miRNA

Literature search

12 open access papers mention mdm-MIR167a
(206 sentences)

Sequence

69814 reads, 4709.0 reads per million, 31 experiments

ucaugcacugguagcgguUGAAGCUGCCAGCAUGAUCUuauaacucccwacuucguuuagggaagaucAGAUCAUCUGGCAGUUUCACCuguuacugguagcauga
(((((((((((((((((.((((((((((((.(((((((.((...((((...........))))..)).))))))))))))))))))).))))))))))).))))))

Structure

      -           u            C       u  aac    wacu 
ucaugc acugguagcgg UGAAGCUGCCAG AUGAUCU au   uccc    u
|||||| ||||||||||| |||||||||||| ||||||| ||   ||||    c
aguacg uggucauuguC ACUUUGACGGUC UACUAGA ua   aggg    g
      a           C            -       c  -ga    auuu 

Annotation confidence High

Genome context

MDC002483.224: 612-717 [+]

Mature mdm-miR167a-5p

• Accession: MIMAT0056617
• Description: Malus domestica mdm-miR167a-5p mature miRNA
• Sequence: 19 - UGAAGCUGCCAGCAUGAUCU - 38
• Evidence: experimental ; unknown

Mature mdm-miR167a-3p

• Accession: MIMAT0025922
• Description: Malus domestica mdm-miR167a-3p mature miRNA
• Sequence: 69 - AGAUCAUCUGGCAGUUUCACC - 89
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47