Stem-loop mdm-MIR156d

Accession

MI0022974

Description

Malus domestica mdm-MIR156d precursor miRNA

Literature search

14 open access papers mention mdm-MIR156d
(295 sentences)

Sequence

55949 reads, 14963.0 reads per million, 31 experiments

uggacuaguagcgagugguggUGACAGAAGAGAGUGAGCACacucgggcaauuguauaaagccauaccuuugcgugauguguGCUCACUUCUCUUUCUGUCAGCcgcacgccgcccyccgccca
(((.......(((.((((((((((((((((((((((((((((((((.((((..((((......))))..)))).))).)))))))))).)))).)))))))).)))).)))))).......)))

Structure

   acuagua   a   -    -        -    -          -   g    uu    aa 
ugg       gcg gug gugg UGACAGAA GAGA GUGAGCACac ucg gcaa  guau  a
|||       ||| ||| |||| |||||||| |||| |||||||||| ||| ||||  ||||   
acc       cgc cgc cgcC ACUGUCUU CUCU CACUCGugug agu cguu  caua  g
   cgccycc   -   a    G        U    U          u   g    uc    cc 

Annotation confidence High

Genome context

Unknown

Mature mdm-miR156d-5p

• Accession: MIMAT0025870
• Description: Malus domestica mdm-miR156d-5p mature miRNA
• Sequence: 22 - UGACAGAAGAGAGUGAGCAC - 41
• Evidence: experimental ; miRNAseq [1]

Mature mdm-miR156d-3p

• Accession: MIMAT0056571
• Description: Malus domestica mdm-miR156d-3p mature miRNA
• Sequence: 83 - GCUCACUUCUCUUUCUGUCAGC - 104
• Evidence: experimental ; unknown

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47